Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs1650661 | chr5:79963363 | G/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1650662 | chr5:79963287 | A/C | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1650663 | chr5:79963197 | T/C | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1650664 | chr5:79963023 | G/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1650665 | chr5:79962578 | C/T | 0.000661 | 214 | 19.35 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1650666 | chr5:79962439 | G/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1650667 | chr5:79962226 | C/T | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1650670 | chr5:79960849 | A/G | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1650671 | chr5:79960268 | C/T | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1650688 | chr5:79956129 | G/A | 3.8E-6 | 210 | 18.67 | 14.87 | 7.47 | KM Plot |
| KIRP | rs1650692 | chr5:79953393 | C/T | 0.000125 | 211 | 17.6 | 14.87 | 8.62 | KM Plot |
| KIRP | rs1650693 | chr5:79952827 | C/T | 0.000105 | 213 | 18.65 | 14.85 | 9.77 | KM Plot |
| KIRP | rs1650694 | chr5:79952426 | G/C | 0.000105 | 213 | 18.65 | 14.85 | 9.77 | KM Plot |
| KIRP | rs1650695 | chr5:79951382 | A/G | 0.000105 | 213 | 18.65 | 14.85 | 9.77 | KM Plot |
| KIRP | rs1650696 | chr5:79951280 | T/A | 0.000105 | 213 | 18.65 | 14.85 | 9.77 | KM Plot |